Plot clustering results

Source: R/nmr_peak_clustering.R

Plot clustering results

nmr_peak_clustering_plot(
  dataset,
  peak_list_clustered,
  NMRExperiments,
  chemshift_range,
  baselineThresh = NULL
)

Arguments

dataset

The nmr_dataset_1D object

peak_list_clustered

A peak list table with a clustered column

NMRExperiments

Two and only two experiments to compare in the plot

chemshift_range

A region, make it so it does not cover a huge range (maybe 1ppm or less)

baselineThresh

If given (as returned from the nmr_baseline_threshold()) the baseline threshold will be plotted. This can be useful to diagnose whether a peak is missing due to this threshold or due to other parameters (e.g. SNR.Th). See nmr_detect_peaks().

Value

A plot of the two experiments in the given chemshift range, with lines connecting peaks identified as the same and dots showing peaks without pairs